To construct the workflow from Taverna program.
1. To open Taverna program. You can see the three part of Taverna program on the first page.


2. Go to file and open the new workflow.

3. Put “ fasta ” in the box search. Choose “ Get Nucleotide FASTA ” and click “ add to the model ”.

4. You can see “ Get Nucleotide FASTA ” in the diagram pane. And you can create the name of new input.

6. Put “ regular ” in the box search. Choose “ Split string into string list by regular expression” and click “ add to the model”.

7. The data of “Split string into string list by regular expression” show in diagram pane.

8. Make connection between workflow inputs and Split string into string list by regular expression. Choose “ Workflow Input Accession_Number ”, select Split string into string list by regular expression and click in the following picture below.

9. The connection show in diagram plane.

10. Make connection between Split string into string list by regular expression and Get Nucleotide FASTA. Choose “ Connect output split ”, select “ Get Nucleotide FASTA ” and click choose an input.

11. The connection show in diagram plane.

12.In the “ repex ”, you can set default value. Input "GU" in the box.

13. You can create new output. And add the name of output data.

14. The data of workflow outputs show in diagram pane.

15. Make connection between Workflow output and Get nucleotide FASTA. Choose “ Output in Get nucleotide FASTA ”, select workflow output and click at fasta sequences.

16. You can get the complete workflow. See in the picture below.

17. You can run workflow, that show in the picture below.


18. You can get the result, that show in the picture below.
ไม่มีความคิดเห็น:
แสดงความคิดเห็น